Portfolio · 2026

Rupan
Sunderapandyan

Chemical Engineering & CS · UW–Madison

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01
01 / About

I'm a sophomore at UW-Madison majoring in Chemical Engineering with a certificate in Computer Sciences.

My interests lie at the intersections of chemical engineering, machine learning, and systems engineering.

02
02 / Projects
03
03 / Experience
Cheminformatics InternUPCOMING
Summer 2026
CAS · Columbus, OH

Analyzing and visualizing chemical structures and names for ML model training, and assisting with services and systems development within an Agile team alongside chemists, biologists, and data scientists.

JavaCheminformaticsMLAgile
Undergraduate Research
Jan 2026 – Present
Huang Group · UW–Madison

Implementing deep learning pipelines using Equivariant GNNs (GotenNet, EGNN), VAMPnets, and novel transition state search algorithms to study complex protein dynamics.

PyTorch GeometricGNNsVAMPNetMDTraj
Undergraduate Research
Oct 2024 – May 2025
Zavala Group · UW–Madison

Developed an optimization model in Julia (JuMP) & Python (BioSTEAM) to solve mass-balance constraints for a multi-stage bioreactor network.

JuliaJuMPBioSTEAMPython
04
04 / Contact
rupanpandyan@gmail.com
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